AMTR_s00048p00151300 (ERD2B,...)

Aliases : ERD2B, evm_27.TU.AmTr_v1.0_scaffold00048.103

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor

Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00048p00151300

Target	Alias	Description	ECC score	Gene Family Method
Ala_g07087	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Ceric.08G005400.1	ERD2B, Ceric.08G005400	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Dcu_g00909	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
LOC_Os11g28340.1	ERD2B, LOC_Os11g28340	ERD2 COPI trafficking K/HDEL-signature receptor	0.05	OrthoFinder output from all 47 species
Spa_g04912	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.02	OrthoFinder output from all 47 species
Zm00001e032183_P001	ERD2, ATERD2,...	ERD2 COPI trafficking K/HDEL-signature receptor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006621	protein retention in ER lumen	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0032507	maintenance of protein location in cell	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
MF	GO:0042277	peptide binding	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
MF	GO:0046923	ER retention sequence binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000133	ER_ret_rcpt	3	134

External Links

No external refs found!