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  5. AMTR_s00048p00143150

AMTR_s00048p00143150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.91

Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00143150

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.03 OrthoFinder output from all 47 species
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.06 OrthoFinder output from all 47 species
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51209 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03492 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00231.t1 ERD4, Aspi01Gene00231 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0795.g087273 ERD4 not classified & original description: CDS=84-998 0.03 OrthoFinder output from all 47 species
Ceric.28G040200.1 Ceric.28G040200 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.27 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.11 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g21426 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40944 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021562001 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
LOC_Os01g72210.1 LOC_Os01g72210 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species
Len_g15514 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28172 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_125601g0010 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Nbi_g13770 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20112 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17063 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27625 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29118 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g036260.4.1 Solyc02g036260 calcium-permeable channel (OSCA) 0.06 OrthoFinder output from all 47 species
Solyc08g076310.3.1 Solyc08g076310 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 322 645
No external refs found!