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  5. AMTR_s00048p00127800

AMTR_s00048p00127800 (CAM3, acam-3,...)


Aliases : CAM3, acam-3, evm_27.TU.AmTr_v1.0_scaffold00048.70

Description : Calmodulin OS=Solanum lycopersicum


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00127800

Target Alias Description ECC score Gene Family Method Actions
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.03 OrthoFinder output from all 47 species
Adi_g109551 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36450 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62171 ACAM-4, CAM4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07660 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24167.t1 CAM3, acam-3,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02979 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04916 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27343 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G015900.1 CAM3, acam-3,... calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g00320 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19236 ATCAL5, CAM2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06394 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g41110.1 ACAM-6, CAM6,... Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Nbi_g13233 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05980 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18118 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08845 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27897 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g025014 ACAM-6, CAM6 calcium sensor *(CML) & original description: CDS=158-607 0.04 OrthoFinder output from all 47 species
Sam_g12806 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 14 73
IPR011992 EF-hand-dom_pair 86 146
No external refs found!