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  5. AMTR_s00047p00177090

AMTR_s00047p00177090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00047.100

No description available


Gene families : OG0001830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00177090

Target Alias Description ECC score Gene Family Method Actions
AT1G69080 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G03290 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g07445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012253001 MRH6 No description available 0.03 OrthoFinder output from all 47 species
Gb_33732 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g65440.1 LOC_Os01g65440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g35380.1 LOC_Os05g35380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g16409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114820.3.1 Solyc03g114820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g060360.3.1 Solyc06g060360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039611_P004 Zm00001e039611 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 82 230
No external refs found!