1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00047p00062520

AMTR_s00047p00062520 (OPT3, ATOPT3,...)


Aliases : OPT3, ATOPT3, evm_27.TU.AmTr_v1.0_scaffold00047.12

Description : Solute transport.carrier-mediated transport.OPT family.oligopeptide transporter (OPT-type)


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00062520
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Aev_g44994 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32248 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g082990.3.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 42 701
No external refs found!