1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00046p00230650

AMTR_s00046p00230650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.174

Description : Glycine-rich domain-containing protein 1 OS=Arabidopsis thaliana


Gene families : OG0000748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000748_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00230650

Target Alias Description ECC score Gene Family Method Actions
AT2G22660 No alias Protein of unknown function (duplicated DUF1399) 0.03 OrthoFinder output from all 47 species
Adi_g056489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18326.t1 Aspi01Gene18326 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19942.t1 Aspi01Gene19942 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G016300.1 Ceric.20G016300 not classified & original description: pacid=50567047... 0.03 OrthoFinder output from all 47 species
Ceric.20G016400.1 Ceric.20G016400 not classified & original description: pacid=50565925... 0.03 OrthoFinder output from all 47 species
Ceric.20G017300.1 Ceric.20G017300 not classified & original description: pacid=50567270... 0.04 OrthoFinder output from all 47 species
Ceric.30G026300.1 Ceric.30G026300 not classified & original description: pacid=50608608... 0.04 OrthoFinder output from all 47 species
Ceric.30G026600.1 Ceric.30G026600 not classified & original description: pacid=50608946... 0.02 OrthoFinder output from all 47 species
Len_g30931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_14876g0010 No alias Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g28813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011691 No alias not classified & original description: CDS=87-2417 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022231 No alias not classified & original description: CDS=605-3013 0.02 OrthoFinder output from all 47 species
Sam_g34606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR009836 GRDP-like 8 92
IPR009836 GRDP-like 88 231
No external refs found!