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  5. AMTR_s00046p00213370

AMTR_s00046p00213370 (OPT4, ATOPT4,...)


Aliases : OPT4, ATOPT4, evm_27.TU.AmTr_v1.0_scaffold00046.139

Description : Solute transport.carrier-mediated transport.OPT family.oligopeptide transporter (OPT-type)


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00213370
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT4G26590 OPT5, ATOPT5 oligopeptide transporter 5 0.02 OrthoFinder output from all 47 species
AT5G64410 OPT4, ATOPT4 oligopeptide transporter 4 0.04 OrthoFinder output from all 47 species
Aspi01Gene20040.t1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000194 OPT3, ATOPT3 oligopeptide transporter *(OPT) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G005700.1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01005133001 OPT3, ATOPT3 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
MA_280506g0010 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species
Mp3g03750.1 ATOPT2, OPT2 oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Ore_g32248 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g082700.4.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Solyc11g012700.2.1 OPT3, ATOPT3,... oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species
Spa_g05930 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 39 695
No external refs found!