1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00046p00191970

AMTR_s00046p00191970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.116

No description available


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00191970

Target Alias Description ECC score Gene Family Method Actions
AT2G22620 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.03 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.04 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g44040.1 LOC_Os08g44040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g45652 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g11760.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g076640.3.1 Solyc04g076640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g011300.2.1 Solyc11g011300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 12 60
No external refs found!