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  5. AMTR_s00046p00174470

AMTR_s00046p00174470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.98

Description : Cell wall.pectin.xylogalacturonan.synthesis.xylogalacturonan xylosyltransferase


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00174470
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Ala_g05140 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006274001 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os07g09050.1 LOC_Os07g09050 xylogalacturonan xylosyltransferase 0.03 OrthoFinder output from all 47 species
Len_g10127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_61350g0010 No alias xylogalacturonan xylosyltransferase 0.04 OrthoFinder output from all 47 species
Mp1g12090.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g12100.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g17370.1 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g23570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 213 494
No external refs found!