Zm00001d023333 (GRMZM2G473138)


Aliases : GRMZM2G473138

Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C. SET domain protein 25 (SDG25)


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d023333
Cluster HCCA cluster: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G61740 ATX3, SDG14 SET domain protein 14 0.02 Gene family
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.12 Gene family
AT5G53430 SET29, SDG29, ATX5 SET domain group 29 0.03 Gene family
Cpa|evm.model.tig00000488.8 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.01 Gene family
Cre11.g475950 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
GSVIVT01006875001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
GSVIVT01027118001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
GSVIVT01038708001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
LOC_Os01g46700 Os01g0655250,... 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
LOC_Os12g41900 Os12g0613200 27.3.69 RNA.regulation of transcription.SET-domain... 0.08 Gene family
MA_10426105g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
MA_18041g0010 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Smo164635 PACid_15412034 No description available 0.02 Gene family
Solyc01g006880.3.1 Solyc01g006880.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
Solyc01g095890.3.1 Solyc01g095890.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.04 Gene family
Solyc03g083410.3.1 Solyc03g083410.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.11 Gene family
Zm00001d008941 GRMZM2G372928 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 1009 1113
No external refs found!