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  5. AMTR_s00046p00132680

AMTR_s00046p00132680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.65

No description available


Gene families : OG0007731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007731_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00132680
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0054.g033740 No alias not classified & original description: CDS=126-5105 0.09 OrthoFinder output from all 47 species
Ceric.33G044800.1 Ceric.33G044800 not classified & original description: pacid=50606456... 0.1 OrthoFinder output from all 47 species
Dcu_g04996 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01015591001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01015592001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_29908 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_29910 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g10481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_127253g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g21755 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g02505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo408700 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc07g007920.3.1 Solyc07g007920 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Spa_g42117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11845 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g13353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022031 Rif1_N 109 243
No external refs found!