LOC_Os09g39270.1


Description : component Pcf11 of Cleavage Factor II (CF-IIm) complex


Gene families : OG_01_0001781 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001781_tree ,
OG_02_0002038 (LandPlants) Phylogenetic Tree(s): OG_02_0002038_tree ,
OG_03_0001962 (SeedPlants) Phylogenetic Tree(s): OG_03_0001962_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39270.1
Cluster HCCA: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00210200 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.08 Archaeplastida
AT2G36480 No alias ENTH/VHS family protein 0.05 Archaeplastida
AT4G04885 PCFS4 PCF11P-similar protein 4 0.03 Archaeplastida
Cpa|evm.model.tig00000396.25 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 Archaeplastida
Cpa|evm.model.tig00000396.26 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.01 Archaeplastida
GSVIVT01012646001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.09 Archaeplastida
GSVIVT01033783001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.06 Archaeplastida
Gb_21315 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.07 Archaeplastida
Gb_26268 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.1 Archaeplastida
MA_10040687g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.07 Archaeplastida
MA_10433250g0020 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.06 Archaeplastida
MA_132868g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.06 Archaeplastida
Mp8g18940.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 Archaeplastida
Pp3c16_6360V3.1 No alias PCF11P-similar protein 4 0.02 Archaeplastida
Pp3c16_6390V3.1 No alias PCF11P-similar protein 4 0.03 Archaeplastida
Solyc09g009120.4.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.09 Archaeplastida
Solyc10g083590.2.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.09 Archaeplastida
Solyc12g094490.2.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 Archaeplastida
Zm00001e009485_P001 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.11 Archaeplastida
Zm00001e021648_P002 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.15 Archaeplastida
Zm00001e033620_P001 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.13 Archaeplastida
Zm00001e039948_P002 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.1 Archaeplastida
AMTR_s00040p00210200 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.06 LandPlants
AT2G36480 No alias ENTH/VHS family protein 0.04 LandPlants
AT4G04885 PCFS4 PCF11P-similar protein 4 0.03 LandPlants
GSVIVT01012646001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.07 LandPlants
GSVIVT01033783001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.06 LandPlants
Gb_21315 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 LandPlants
Gb_26268 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.09 LandPlants
MA_10433250g0020 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 LandPlants
MA_132868g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 LandPlants
Mp8g18940.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.07 LandPlants
Pp3c16_6390V3.1 No alias PCF11P-similar protein 4 0.01 LandPlants
Solyc09g009120.4.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 LandPlants
Solyc10g083590.2.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.09 LandPlants
Solyc12g094490.2.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 LandPlants
Zm00001e009485_P001 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 LandPlants
Zm00001e021648_P002 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.13 LandPlants
Zm00001e033620_P001 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.12 LandPlants
Zm00001e039948_P002 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 LandPlants
AMTR_s00040p00210200 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.05 SeedPlants
AT2G36480 No alias ENTH/VHS family protein 0.04 SeedPlants
AT4G04885 PCFS4 PCF11P-similar protein 4 0.03 SeedPlants
GSVIVT01012646001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.06 SeedPlants
GSVIVT01033783001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.05 SeedPlants
Gb_21315 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 SeedPlants
Gb_26268 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 SeedPlants
MA_10433250g0020 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 SeedPlants
MA_132868g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 SeedPlants
Solyc09g009120.4.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.07 SeedPlants
Solyc10g083590.2.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 SeedPlants
Solyc12g094490.2.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 SeedPlants
Zm00001e009485_P001 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.07 SeedPlants
Zm00001e021648_P002 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.11 SeedPlants
Zm00001e033620_P001 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.11 SeedPlants
Zm00001e039948_P002 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.08 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!