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  5. AMTR_s00046p00010710

AMTR_s00046p00010710 (SYN3, ATRAD21.2,...)


Aliases : SYN3, ATRAD21.2, ATSYN3, evm_27.TU.AmTr_v1.0_scaffold00046.1

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component


Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00010710
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aop_g21978 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Cba_g20812 ATRAD21.3, SYN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre09.g412450 ATRAD21.3, SYN4 Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Ehy_g09953 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Ehy_g29051 ATRAD21.3, SYN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31762 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.04 OrthoFinder output from all 47 species
Smo122410 ATRAD21.3, SYN4 Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Tin_g14232 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR006910 Rad21_Rec8_N 1 111
No external refs found!