AMTR_s00045p00228470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.331

No description available


Gene families : OG0002235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002235_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00228470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02918p00001350 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G21185 No alias unknown protein; Has 9 Blast hits to 9 proteins in 4... 0.02 OrthoFinder output from all 47 species
Aev_g20250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47615.t1 Aspi01Gene47615 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G072700.1 Ceric.12G072700 not classified & original description: pacid=50602480... 0.02 OrthoFinder output from all 47 species
Dac_g04846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17861 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33579 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g10510.1 LOC_Os06g10510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g47660.1 LOC_Os07g47660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g09240.1 LOC_Os10g09240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_12014g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16571g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_216359g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_956300g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Pir_g47761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55876 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015345 No alias not classified & original description: CDS=1-375 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023090 No alias not classified & original description: CDS=1-462 0.03 OrthoFinder output from all 47 species
Solyc03g123380.1.1 Solyc03g123380 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc10g044880.1.1 Solyc10g044880 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g04832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001624_P001 Zm00001e001624 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e016013_P001 Zm00001e016013 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e034294_P001 Zm00001e034294 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038220_P001 Zm00001e038220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!