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  5. AMTR_s00045p00224630

AMTR_s00045p00224630 (NLA, BAH1,...)


Aliases : NLA, BAH1, evm_27.TU.AmTr_v1.0_scaffold00045.317

Description : Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica


Gene families : OG0001271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00224630
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Adi_g010237 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31170 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29163.t1 Aspi01Gene29163 E3 ubiquitin ligase *(NLA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60895.t1 NLA, BAH1,... E3 ubiquitin ligase *(NLA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G057000.1 NLA, BAH1,... E3 ubiquitin ligase *(NLA) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_23910 NLA, BAH1 Probable E3 ubiquitin-protein ligase BAH1-like 1... 0.03 OrthoFinder output from all 47 species
Len_g22541 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26381 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c26_11740V3.1 Pp3c26_11740 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc... 0.02 OrthoFinder output from all 47 species
Spa_g08045 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR004331 SPX_dom 100 149
No external refs found!