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  5. AMTR_s00045p00224440

AMTR_s00045p00224440 (CLF, SET1, ICU1,...)


Aliases : CLF, SET1, ICU1, SDG1, evm_27.TU.AmTr_v1.0_scaffold00045.316

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component


Gene families : OG0002981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002981_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00224440

Target Alias Description ECC score Gene Family Method Actions
MA_10435033g0010 CLF, SET1, ICU1, SDG1 catalytic component CLF|SWN|MEA of VRN/FIS/EMF core... 0.03 OrthoFinder output from all 47 species
Ppi_g14522 CLF, SET1, ICU1, SDG1 catalytic component *(CLF/SWN/MEA) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Zm00001e001446_P002 SDG10, EZA1,... catalytic component CLF|SWN|MEA of VRN/FIS/EMF core... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 769 872
No external refs found!