1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00045p00206320

AMTR_s00045p00206320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.273

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL29 component


Gene families : OG0005790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005790_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00206320

Target Alias Description ECC score Gene Family Method Actions
Adi_g013632 No alias component *(uL29m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g00232 No alias component *(uL29m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g44586 No alias component *(uL29m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g15712 No alias component *(uL29m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.09G042100.1 Ceric.09G042100 component *(uL29m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g03642 No alias component *(uL29m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g02680 No alias component *(uL29m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005761 mitochondrial ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR010729 Ribosomal_L47_mit 33 119
No external refs found!