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  5. AMTR_s00045p00175560

AMTR_s00045p00175560 (CP12, CP12-2,...)


Aliases : CP12, CP12-2, evm_27.TU.AmTr_v1.0_scaffold00045.209

Description : Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00175560

Target Alias Description ECC score Gene Family Method Actions
AT3G62410 CP12, CP12-2 CP12 domain-containing protein 2 0.04 OrthoFinder output from all 47 species
Adi_g016914 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Adi_g048511 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.1 OrthoFinder output from all 47 species
Adi_g106135 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Adi_g106137 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Ala_g00257 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Aob_g00251 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Aop_g10777 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Ceric.31G034600.1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Cre08.g380250 CP12-1, CP12 Calvin cycle protein CP12, chloroplastic... 0.04 OrthoFinder output from all 47 species
Dac_g12215 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.08 OrthoFinder output from all 47 species
Dac_g32821 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.07 OrthoFinder output from all 47 species
Dcu_g22530 CP12-3 regulatory protein *(CP12) of GAPDH activity & original... 0.08 OrthoFinder output from all 47 species
Dcu_g34639 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.1 OrthoFinder output from all 47 species
Dcu_g40442 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.07 OrthoFinder output from all 47 species
Dde_g03082 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Ehy_g17531 CP12-3 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Gb_03515 CP12, CP12-2 Calvin cycle protein CP12-2, chloroplastic... 0.12 OrthoFinder output from all 47 species
LOC_Os01g19740.1 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19380.1 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g42311 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
MA_524595g0010 CP12, CP12-2 Calvin cycle protein CP12-2, chloroplastic... 0.08 OrthoFinder output from all 47 species
Mp2g10550.1 CP12-3 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g10264 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Nbi_g01618 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Ore_g08879 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Ore_g22166 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Pir_g14932 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.07 OrthoFinder output from all 47 species
Pnu_g05976 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Pnu_g31243 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Pp3c21_11130V3.1 CP12-1, CP12,... CP12 domain-containing protein 2 0.01 OrthoFinder output from all 47 species
Pp3c26_5440V3.1 CP12-1, CP12, Pp3c26_5440 CP12 domain-containing protein 1 0.01 OrthoFinder output from all 47 species
Ppi_g26744 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Ppi_g40122 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Ppi_g52334 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022914 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Solyc01g079470.4.1 CP12-1, CP12,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g009630.1.1 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.05 OrthoFinder output from all 47 species
Spa_g00117 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.12 OrthoFinder output from all 47 species
Spa_g04578 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Tin_g09684 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Zm00001e036178_P001 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003823 CP12_dom 57 126
No external refs found!