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  5. AMTR_s00045p00158740

AMTR_s00045p00158740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.176

No description available


Gene families : OG0004892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00158740
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Aob_g17873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR012948 AARP2CN 240 321
IPR007034 BMS1_TSR1_C 502 798
No external refs found!