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  5. AMTR_s00045p00113980

AMTR_s00045p00113980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.109

Description : Protein CHUP1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00113980
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G07120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT4G18570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g036037 CHUP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25523 CHUP1 motility factor *(CHUP) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g07778 CHUP1 motility factor *(CHUP) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g50900 CHUP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04082 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12898 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008227001 CHUP1 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01011966001 CHUP1 Cytoskeleton.cp-actin-dependent plastid movement.CHUP... 0.04 OrthoFinder output from all 47 species
GSVIVT01017698001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g46340.1 LOC_Os01g46340 regulatory protein (IPGA) of cortical microtubule organisation 0.04 OrthoFinder output from all 47 species
Lfl_g39509 CHUP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12617 CHUP1 motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35111 No alias motility factor *(CHUP) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05094 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55944 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21079 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020303_P001 Zm00001e020303 regulatory protein (IPGA) of cortical microtubule organisation 0.05 OrthoFinder output from all 47 species
Zm00001e030014_P001 Zm00001e030014 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038406_P001 Zm00001e038406 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!