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  5. AMTR_s00045p00096080

AMTR_s00045p00096080 (RL1, RSM2, ATRL1,...)


Aliases : RL1, RSM2, ATRL1, evm_27.TU.AmTr_v1.0_scaffold00045.92

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0002893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00096080
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT3G10595 No alias Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36570 ATRL3, RL3 RAD-like 3 0.06 OrthoFinder output from all 47 species
AT5G23650 No alias Homeodomain-like transcriptional regulator 0.02 OrthoFinder output from all 47 species
AT5G47290 No alias myb family transcription factor 0.03 OrthoFinder output from all 47 species
GSVIVT01009723001 RL5, RSM4, ATRL5 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Gb_08692 ATRL2, MEE3, RSM1 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os01g44390.2 ATRL2, MEE3,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os01g47370.1 LOC_Os01g47370 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50350.1 RSM3, ATRL6,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_6326342g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc11g071500.3.1 Solyc11g071500 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e032519_P001 ATRL2, MEE3,... transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!