AMTR_s00045p00058330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.41

No description available


Gene families : OG0001865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001865_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00058330

Target Alias Description ECC score Gene Family Method Actions
AT1G21670 No alias LOCATED IN: cell wall, plant-type cell wall; EXPRESSED... 0.02 OrthoFinder output from all 47 species
AT4G01870 No alias tolB protein-related 0.05 OrthoFinder output from all 47 species
Adi_g007116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15296.t1 Aspi01Gene15296 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38536.t1 Aspi01Gene38536 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G043000.1 Ceric.30G043000 not classified & original description: pacid=50608395... 0.01 OrthoFinder output from all 47 species
Dcu_g01531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15673 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_15674 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30451 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g44410.1 LOC_Os07g44410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434906g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g61810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g008620.1.1 Solyc06g008620 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g18912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011678_P001 Zm00001e011678 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011659 PD40 484 512
IPR011659 PD40 443 472
No external refs found!