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  5. AMTR_s00045p00055640

AMTR_s00045p00055640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.36

No description available


Gene families : OG0001647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00055640
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G10380 No alias Putative membrane lipoprotein 0.04 OrthoFinder output from all 47 species
AT1G11915 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.12 OrthoFinder output from all 47 species
AT5G50290 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Adi_g102967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12193 WAKL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0035.g025562 No alias not classified & original description: CDS=330-1364 0.03 OrthoFinder output from all 47 species
Cba_g01835 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.01G065700.1 Ceric.01G065700 not classified & original description: pacid=50591366... 0.03 OrthoFinder output from all 47 species
Ceric.21G023700.1 Ceric.21G023700 not classified & original description: pacid=50602847... 0.03 OrthoFinder output from all 47 species
Ceric.35G018700.1 Ceric.35G018700 not classified & original description: pacid=50581933... 0.02 OrthoFinder output from all 47 species
Dcu_g00903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03653 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g14909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007721001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01012680001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01017668001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01020110001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_00323 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_22330 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33860.1 LOC_Os05g33860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g25950.1 LOC_Os06g25950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10436612g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_104588g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g09571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008851 No alias not classified & original description: CDS=1-1029 0.04 OrthoFinder output from all 47 species
Solyc02g080900.3.1 Solyc02g080900 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc03g112790.3.1 Solyc03g112790 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc05g006700.4.1 Solyc05g006700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g012280.3.1 Solyc05g012280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g29182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56941 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002364_P001 Zm00001e002364 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025287 WAK_GUB 32 132
No external refs found!