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  5. AMTR_s00045p00043360

AMTR_s00045p00043360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.22

Description : CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0003340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00043360

Target Alias Description ECC score Gene Family Method Actions
AT5G10860 No alias Cystathionine beta-synthase (CBS) family protein 0.04 OrthoFinder output from all 47 species
Sam_g11285 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g12940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 183 238
IPR000644 CBS_dom 126 170
No external refs found!