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  5. AMTR_s00045p00028830

AMTR_s00045p00028830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.6

Description : Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana


Gene families : OG0001880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00028830

Target Alias Description ECC score Gene Family Method Actions
Adi_g107358 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Als_g20989 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Azfi_s0384.g067472 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Azfi_s2824.g113325 No alias not classified & original description: CDS=370-774 0.04 OrthoFinder output from all 47 species
Cba_g27016 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Cba_g32209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44993 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Ehy_g16159 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g51550.1 LOC_Os05g51550 Chromatin modification-related protein EAF1 B... 0.04 OrthoFinder output from all 47 species
LOC_Os08g08000.1 LOC_Os08g08000 component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
Ore_g18801 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Pir_g12255 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Pnu_g07031 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.06 OrthoFinder output from all 47 species
Ppi_g42118 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021615 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Zm00001e020520_P002 Zm00001e020520 component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!