Aliases : LINC4, evm_27.TU.AmTr_v1.0_scaffold00044.217
Description : Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear lamina.CRWN lamin-like protein
Gene families : OG0002096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G68790 | LINC3 | little nuclei3 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0006.g010369 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g07777 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G023500.1 | LINC2, Ceric.07G023500 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g23399 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01007428001 | LINC4 | Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031076001 | LINC1 | Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g48010.1 | LINC1, LOC_Os02g48010 | CRWN nuclear lamina lamin-like protein | 0.04 | OrthoFinder output from all 47 species | |
Ore_g19679 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g40515 | LINC1 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g11617 | LINC2 | nuclear lamina lamin-like protein *(CRWN) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g089800.3.1 | LINC1, Solyc02g089800 | CRWN nuclear lamina lamin-like protein | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g045050.4.1 | LINC1, Solyc03g045050 | CRWN nuclear lamina lamin-like protein | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019705_P002 | LINC4, Zm00001e019705 | CRWN nuclear lamina lamin-like protein | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023357_P001 | LINC1, Zm00001e023357 | CRWN nuclear lamina lamin-like protein | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000156 | phosphorelay response regulator activity | IEP | HCCA |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0007154 | cell communication | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |