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  5. AMTR_s00044p00173720

AMTR_s00044p00173720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.190

Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NIN transcription factor


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00173720

Target Alias Description ECC score Gene Family Method Actions
AT1G64530 No alias Plant regulator RWP-RK family protein 0.04 OrthoFinder output from all 47 species
AT2G17150 No alias Plant regulator RWP-RK family protein 0.05 OrthoFinder output from all 47 species
AT2G43500 No alias Plant regulator RWP-RK family protein 0.02 OrthoFinder output from all 47 species
AT4G35270 No alias Plant regulator RWP-RK family protein 0.03 OrthoFinder output from all 47 species
Als_g21764 No alias transcription factor *(NIN) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g31826 No alias NLP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038926 No alias transcription factor *(NIN) & original description: CDS=1285-4890 0.04 OrthoFinder output from all 47 species
Cba_g32448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G009600.1 Ceric.07G009600 transcription factor *(NIN) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G019500.1 Ceric.21G019500 transcription factor *(NIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g10540 No alias transcription factor *(NIN) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28707 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22670 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g12800.1 NLP7 transcription factor (NLP) 0.02 OrthoFinder output from all 47 species
Msp_g25498 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17966 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14249 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g112190.3.1 Solyc01g112190 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species
Solyc08g013900.3.1 Solyc08g013900 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species
Solyc08g082750.3.1 NLP7, Solyc08g082750 transcription factor (NLP). NLP6/7 nitrate response... 0.02 OrthoFinder output from all 47 species
Spa_g53032 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000253_P001 Zm00001e000253 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 170 251
No external refs found!