1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00044p00170650

AMTR_s00044p00170650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.189

No description available


Gene families : OG0003125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003125_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00170650

Target Alias Description ECC score Gene Family Method Actions
AT4G38350 No alias Patched family protein 0.03 OrthoFinder output from all 47 species
Ala_g15273 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0071.g036823 No alias not classified & original description: CDS=1-1860 0.02 OrthoFinder output from all 47 species
Cba_g01341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G076200.1 Ceric.16G076200 not classified & original description: pacid=50589693... 0.04 OrthoFinder output from all 47 species
Dcu_g41818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023884001 No alias Pentatricopeptide repeat-containing protein At2g17210... 0.02 OrthoFinder output from all 47 species
Lfl_g02437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008158 hedgehog receptor activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004399 histidinol dehydrogenase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003392 Ptc/Disp 1076 1276
No external refs found!