AMTR_s00044p00093570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.65

No description available


Gene families : OG0000610 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00093570

Target Alias Description ECC score Gene Family Method Actions
AT2G35155 No alias Trypsin family protein 0.04 OrthoFinder output from all 47 species
Adi_g055228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43080 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61191.t1 Aspi01Gene61191 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000339 No alias not classified & original description: CDS=124-1131 0.03 OrthoFinder output from all 47 species
Azfi_s0036.g025765 No alias not classified & original description: CDS=643-2136 0.02 OrthoFinder output from all 47 species
Cba_g07627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G072100.1 Ceric.08G072100 not classified & original description: pacid=50637671... 0.05 OrthoFinder output from all 47 species
Ceric.20G028500.1 Ceric.20G028500 not classified & original description: pacid=50567652... 0.03 OrthoFinder output from all 47 species
Ceric.29G061600.1 Ceric.29G061600 not classified & original description: pacid=50624693... 0.08 OrthoFinder output from all 47 species
Dcu_g37017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12279 No alias no description available(sp|b4xt64|nal1_orysj : 668.0) 0.03 OrthoFinder output from all 47 species
Msp_g15047 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013070 No alias not classified & original description: CDS=630-2348 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025325 No alias not classified & original description: CDS=1081-2391 0.03 OrthoFinder output from all 47 species
Sam_g18223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g51669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006945_P001 Zm00001e006945 no description available(sp|b4xt64|nal1_orysj : 963.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!