1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00044p00073920

AMTR_s00044p00073920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.47

Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00073920

Target Alias Description ECC score Gene Family Method Actions
AT1G76950 PRAF1 Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Als_g16321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40930.t1 Aspi01Gene40930 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65114.t1 Aspi01Gene65114 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035215001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g116360.2.1 Solyc03g116360 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 647 706
IPR013591 Brevis_radix_dom 1060 1114
IPR000408 Reg_chr_condens 423 472
IPR000408 Reg_chr_condens 587 636
IPR000408 Reg_chr_condens 491 537
IPR000408 Reg_chr_condens 320 368
No external refs found!