AMTR_s00044p00035820 (IDD4, AtIDD4,...)

Aliases : IDD4, AtIDD4, evm_27.TU.AmTr_v1.0_scaffold00044.11

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00044p00035820

Target	Alias	Description	ECC score	Gene Family Method
Adi_g099246	NUC	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02498	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g03862	IDD16, AtIDD16	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!