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  5. AMTR_s00044p00023110

AMTR_s00044p00023110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.6

Description : Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana


Gene families : OG0019182 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0019182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00023110
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
MA_10090072g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 284 329
IPR002885 Pentatricopeptide_repeat 83 109
IPR002885 Pentatricopeptide_repeat 157 180
IPR002885 Pentatricopeptide_repeat 184 214
IPR002885 Pentatricopeptide_repeat 55 81
No external refs found!