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  5. AMTR_s00043p00126560

AMTR_s00043p00126560 (AtOCT4, 4-Oct,...)


Aliases : AtOCT4, 4-Oct, evm_27.TU.AmTr_v1.0_scaffold00043.19

Description : Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT-type)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00043p00126560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00167630 AtOCT1, 1-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AT1G79410 AtOCT5, 5-Oct organic cation/carnitine transporter5 0.06 OrthoFinder output from all 47 species
Aob_g17442 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58798.t1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G085500.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.22G012900.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.05 OrthoFinder output from all 47 species
Gb_11984 AtOCT1, 1-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Lfl_g39356 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_6288g0010 AtOCT1, 1-Oct organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Ore_g09748 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31037 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29511 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g053860.4.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 125 512
No external refs found!