1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00042p00019010

AMTR_s00042p00019010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00042.2

Description : Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component


Gene families : OG0000345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00042p00019010

Target Alias Description ECC score Gene Family Method Actions
AT3G09880 ATB' BETA Protein phosphatase 2A regulatory B subunit family protein 0.03 OrthoFinder output from all 47 species
Adi_g017537 ATB' GAMMA regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Adi_g083416 ATB' BETA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06437 ATB' GAMMA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06961 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Aop_g21191 ATB' GAMMA regulatory component B1 of PP2A phosphatase complexes &... 0.05 OrthoFinder output from all 47 species
Azfi_s0284.g063097 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.04 OrthoFinder output from all 47 species
Ceric.01G019200.1 ATB' GAMMA,... regulatory component B1 of PP2A phosphatase complexes &... 0.04 OrthoFinder output from all 47 species
Ceric.30G034600.1 ATB' GAMMA,... regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001265.17 ATB' BETA Protein modification.dephosphorylation.serine/threonine... 0.01 OrthoFinder output from all 47 species
Dcu_g07030 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Dde_g12028 No alias regulatory component B1 of PP2A phosphatase complexes &... 0.04 OrthoFinder output from all 47 species
Ehy_g16906 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
GSVIVT01001852001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
Gb_29616 ATB' GAMMA regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species
Lfl_g04771 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
MA_118203g0010 No alias Serine/threonine protein phosphatase 2A 57 kDa... 0.02 OrthoFinder output from all 47 species
MA_25374g0020 ATB' BETA regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species
MA_76721g0020 ATB' GAMMA Serine/threonine protein phosphatase 2A 59 kDa... 0.04 OrthoFinder output from all 47 species
Nbi_g02315 ATB' GAMMA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Nbi_g14036 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Pnu_g02453 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.02 OrthoFinder output from all 47 species
Solyc10g083920.2.1 ATB' BETA, Solyc10g083920 regulatory component B1 of PP2A phosphatase complexes 0.02 OrthoFinder output from all 47 species
Zm00001e007774_P001 Zm00001e007774 regulatory component B1 of PP2A phosphatase complexes 0.04 OrthoFinder output from all 47 species
Zm00001e029240_P001 ATB' GAMMA,... regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002554 PP2A_B56 48 465
No external refs found!