Aliases : PUB26, evm_27.TU.AmTr_v1.0_scaffold00041.176
Description : Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
Gene families : OG0002525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002525_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00041p00198410 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01026271001 | No alias | Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEA | Interproscan |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 233 | 303 |
No external refs found! |