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  5. Aev_g06412

Aev_g06412 (UBQ6)


Aliases : UBQ6

Description : component *(eS31) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000000 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g06412
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00094950 UBQ6,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 39 species
AMTR_s00040p00104050 evm_27.TU.AmTr_v1... Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris 0.01 OrthoFinder output from all 39 species
AT1G23410 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 OrthoFinder output from all 39 species
AT2G36170 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.01 OrthoFinder output from all 39 species
AT2G47110 UBQ6 ubiquitin 6 0.01 OrthoFinder output from all 39 species
AT3G52590 UBQ1, EMB2167,... ubiquitin extension protein 1 0.01 OrthoFinder output from all 39 species
AT3G62250 UBQ5 ubiquitin 5 0.02 OrthoFinder output from all 39 species
Adi_g053925 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Adi_g066647 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Adi_g068461 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Adi_g069036 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Adi_g086496 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g31252 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ala_g32223 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Als_g28226 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Als_g28227 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Als_g41068 No alias UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Als_g41309 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Als_g42544 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Als_g43093 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Aob_g09635 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Aob_g38880 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aop_g16439 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aspi01Gene54450.t1 Aspi01Gene54450 component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Cba_g37486 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Cba_g37555 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Cba_g43236 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Cba_g49223 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Cba_g75867 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ceric.27G040600.1 Ceric.27G040600 component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ceric.31G024800.1 UBQ6, Ceric.31G024800 component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Dcu_g38726 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Dde_g22752 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Dde_g29687 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Dde_g36592 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Dde_g42016 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Dde_g43693 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Dde_g44997 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dde_g47085 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Ehy_g11526 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ehy_g13677 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
GSVIVT01033876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 39 species
Gb_01257 No alias component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Gb_15027 UBQ6 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
Gb_25061 UBQ11 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 39 species
Gb_28712 UBQ11 ubiquitin-fold protein (UBQ) 0.01 OrthoFinder output from all 39 species
Gb_35774 UBQ11 Polyubiquitin (Fragment) OS=Linum usitatissimum... 0.01 OrthoFinder output from all 39 species
Gb_41257 No alias component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
LOC_Os03g13170.1 LOC_Os03g13170 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 39 species
LOC_Os05g06770.1 UBQ6, LOC_Os05g06770 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
LOC_Os09g39500.1 LOC_Os09g39500 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 39 species
Len_g19676 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Len_g27536 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Len_g40363 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Len_g40842 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Len_g41265 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Len_g41397 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g16898 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g18669 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g20349 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g23305 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g26440 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g26614 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g26766 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
MA_13101g0020 No alias component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
MA_136975g0010 UBQ11 Polyubiquitin (Fragment) OS=Nicotiana sylvestris... 0.01 OrthoFinder output from all 39 species
Mp7g12760.1 UBQ6 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
Mp8g00780.1 No alias component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 39 species
Msp_g06697 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Msp_g24177 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Msp_g34148 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g38968 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Nbi_g08396 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ore_g02492 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Ore_g07464 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g64203 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g66174 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Pnu_g26809 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Pp3c10_25270V3.1 Pp3c10_25270 ubiquitin extension protein 1 0.02 OrthoFinder output from all 39 species
Pp3c12_5640V3.1 UBQ6, Pp3c12_5640 ubiquitin 6 0.02 OrthoFinder output from all 39 species
Pp3c12_5760V3.1 UBQ6, Pp3c12_5760 ubiquitin 6 0.02 OrthoFinder output from all 39 species
Pp3c20_23170V3.1 Pp3c20_23170 ubiquitin extension protein 1 0.01 OrthoFinder output from all 39 species
Pp3c24_430V3.1 Pp3c24_430 ubiquitin extension protein 1 0.01 OrthoFinder output from all 39 species
Pp3c3_25480V3.1 Pp3c3_25480 ubiquitin extension protein 1 0.01 OrthoFinder output from all 39 species
Pp3c4_11930V3.1 Pp3c4_11930 Ubiquitin supergroup;Ribosomal protein L40e 0.01 OrthoFinder output from all 39 species
Pp3c4_19000V3.1 UBQ6, Pp3c4_19000 ubiquitin 6 0.02 OrthoFinder output from all 39 species
Pp3c8_14230V3.1 UBQ6, Pp3c8_14230 ubiquitin 6 0.01 OrthoFinder output from all 39 species
Ppi_g34620 UBQ11 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g37071 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0055.g014510 UBQ6 not classified & original description: CDS=1-258 0.01 OrthoFinder output from all 39 species
Sam_g07360 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Sam_g07364 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Sam_g20114 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Sam_g26881 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Sam_g37100 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Sam_g40047 No alias UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Sam_g43414 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Sam_g44361 No alias UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Sam_g47053 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Sam_g47362 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Sam_g51978 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Solyc01g068045.1.1 UBQ6, Solyc01g068045 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
Solyc01g096290.4.1 Solyc01g096290 no hits & (original description: none) 0.01 OrthoFinder output from all 39 species
Solyc03g082570.4.1 Solyc03g082570 component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Solyc08g083120.3.1 Solyc08g083120 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 39 species
Solyc12g098940.2.1 UBQ6, Solyc12g098940 component RPS27a of SSU proteome 0.02 OrthoFinder output from all 39 species
Solyc12g099025.1.1 UBQ6, Solyc12g099025 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species
Spa_g02055 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Spa_g29979 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Spa_g33609 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g33745 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g36120 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g48574 No alias UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g28918 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Zm00001e000962_P001 Zm00001e000962 component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Zm00001e009474_P001 Zm00001e009474 component RPL40 of LSU proteome component 0.01 OrthoFinder output from all 39 species
Zm00001e026237_P001 UBQ6, Zm00001e026237 component RPS27a of SSU proteome 0.02 OrthoFinder output from all 39 species
Zm00001e028916_P001 UBQ6, Zm00001e028916 component RPS27a of SSU proteome 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR002906 Ribosomal_S27a 102 147
No external refs found!