1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00041p00082900

AMTR_s00041p00082900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.49

Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00082900

Target Alias Description ECC score Gene Family Method Actions
Adi_g075764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G058800.1 Ceric.04G058800 not classified & original description: pacid=50631350... 0.04 OrthoFinder output from all 47 species
Ceric.20G007500.1 Ceric.20G007500 not classified & original description: pacid=50566839... 0.05 OrthoFinder output from all 47 species
Dcu_g01919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14149 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_21243 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_26190 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_38984 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os10g08570.1 LOC_Os10g08570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 450 515
IPR000504 RRM_dom 353 413
IPR000504 RRM_dom 273 342
No external refs found!