AMTR_s00040p00171480 (AGO7, ZIP,...)


Aliases : AGO7, ZIP, evm_27.TU.AmTr_v1.0_scaffold00040.155

Description : Protein argonaute 7 OS=Arabidopsis thaliana


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00171480

Target Alias Description ECC score Gene Family Method Actions
Adi_g003675 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g004907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089102 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Adi_g113326 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Adi_g114845 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06124 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g10073 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aev_g23886 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28185 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14664 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g09329 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.05 OrthoFinder output from all 47 species
Aob_g04459 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23145 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Aop_g08146 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71412.t1 AGO9, Aspi01Gene71412 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0095.g043652 AGO1 not classified & original description: CDS=139-2811 0.05 OrthoFinder output from all 47 species
Azfi_s0368.g067024 AGO4, OCP11 not classified & original description: CDS=1-2574 0.04 OrthoFinder output from all 47 species
Cba_g16425 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Cba_g25204 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g57125 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G040900.1 AGO4, OCP11,... siRNA-integrating factor *(AGO) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g29067 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Dac_g42950 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03128 PNH, AGO10, ZLL not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44557 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07096 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37805 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Dde_g48495 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08293 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08893 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Len_g18589 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Len_g35246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59218 AGO9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05724 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.01 OrthoFinder output from all 47 species
Nbi_g06312 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ore_g10197 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30168 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g04951 AGO7, ZIP not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g20333 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23416 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08413 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Sam_g25176 No alias siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39081 No alias regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Smo109987 AGO1 Chromatin organisation.DNA methylation.canonical... 0.05 OrthoFinder output from all 47 species
Smo110151 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Spa_g09278 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12263 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38063 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004997_P001 PNH, AGO10, ZLL,... Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e012276_P001 AGO1, Zm00001e012276 Protein argonaute 12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003165 Piwi 45 126
No external refs found!