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  5. AMTR_s00040p00149460

AMTR_s00040p00149460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.121

No description available


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00149460
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Adi_g088439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52568.t1 Aspi01Gene52568 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65113.t1 Aspi01Gene65113 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001281 No alias not classified & original description: CDS=1653-4202 0.02 OrthoFinder output from all 47 species
Ehy_g16323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_136157g0010 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Pir_g05000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 48 81
No external refs found!