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  5. AMTR_s00040p00128880

AMTR_s00040p00128880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.96

Description : F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana


Gene families : OG0003405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003405_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00128880
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00248090 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00017p00248550 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00242200 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00064030 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00125130 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00054950 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 42
No external refs found!