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  5. AMTR_s00040p00119530

AMTR_s00040p00119530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.88

Description : Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana


Gene families : OG0002136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00119530
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Ala_g00350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g491150 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.02 OrthoFinder output from all 47 species
Spa_g08217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR007262 Vps55/LEPROT 2 107
No external refs found!