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  5. AMTR_s00040p00111170

AMTR_s00040p00111170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.80

Description : Protein ORANGE-GREEN, chloroplastic OS=Cucumis melo


Gene families : OG0002040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00111170
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G61670 No alias BEST Arabidopsis thaliana protein match is: chaperone... 0.03 OrthoFinder output from all 47 species
Ceric.12G073300.1 Ceric.12G073300 not classified & original description: pacid=50601046... 0.03 OrthoFinder output from all 47 species
Ehy_g03483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g43500.1 LOC_Os02g43500 Protein ORANGE, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g07410.1 No alias Protein ORANGE, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g11635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g093830.3.1 Solyc03g093830 Protein ORANGE, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA

No InterPro domains available for this sequence

No external refs found!