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  5. AMTR_s00040p00091880

AMTR_s00040p00091880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.52

Description : Multi-process regulation.Rop GTPase regulatory system.RopGAP GTPase-activating protein


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00091880
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.02 OrthoFinder output from all 47 species
Ala_g02417 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G082200.1 Ceric.07G082200 ROP-activating protein *(RopGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G023600.1 Ceric.30G023600 ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g08548 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002103 No alias ROP-activating protein *(RopGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g17013 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018531_P001 Zm00001e018531 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 89 124
IPR000198 RhoGAP_dom 152 288
No external refs found!