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Description : component *(RRP40) of exosome EXO9 core complex & original description: none
Gene families : OG0006314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006314_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000361.52 | No alias | RNA processing.RNA decay.exosome complex.EXO9 core... | 0.02 | OrthoFinder output from all 47 species | |
| Cre07.g319900 | No alias | RNA processing.RNA decay.exosome complex.EXO9 core... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g47256.4 | LOC_Os01g47256 | component RRP40 of exosome EXO9 core complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g16490.1 | No alias | component RRP40 of exosome EXO9 core complex | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11132 | No alias | component *(RRP40) of exosome EXO9 core complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020253_P003 | Zm00001e020253 | component RRP40 of exosome EXO9 core complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020254_P001 | Zm00001e020254 | component RRP40 of exosome EXO9 core complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004088 | KH_dom_type_1 | 166 | 214 |
| No external refs found! |