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  5. AMTR_s00039p00230320

AMTR_s00039p00230320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.216

No description available


Gene families : OG0000659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00230320
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G20190 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g28880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07571.t1 Aspi01Gene07571 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39533.t1 Aspi01Gene39533 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0343.g065741 No alias not classified & original description: CDS=55-852 0.04 OrthoFinder output from all 47 species
Azfi_s0361.g066884 No alias not classified & original description: CDS=167-1051 0.03 OrthoFinder output from all 47 species
Cba_g20211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10129 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g42610.1 LOC_Os10g42610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g16106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_13355g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g07073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g008210.4.1 Solyc07g008210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!