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  5. AMTR_s00039p00227540

AMTR_s00039p00227540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.210

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00039p00227540

Target Alias Description ECC score Gene Family Method Actions
AT1G30200 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
Adi_g110852 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64471.t1 Aspi01Gene64471 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene64471.t2 Aspi01Gene64471 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene72095.t1 Aspi01Gene72095 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0026.g023330 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g13923 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dde_g23862 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g04831 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g09750 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os03g20500.1 LOC_Os03g20500 component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
LOC_Os05g43490.2 LOC_Os05g43490 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Len_g08479 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_181044g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g03134 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Nbi_g03021 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g01056 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g12490 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g03472 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g17463 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g41362 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g05534 No alias substrate adaptor *(AUF) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!