1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00225530

AMTR_s00039p00225530 (PIS1, ABCG37, ATPDR9,...)


Aliases : PIS1, ABCG37, ATPDR9, PDR9, evm_27.TU.AmTr_v1.0_scaffold00039.206

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00225530
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00192990 PDR11, ATPDR11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 OrthoFinder output from all 47 species
AT1G59870 PEN3, ABCG36,... ABC-2 and Plant PDR ABC-type transporter family protein 0.03 OrthoFinder output from all 47 species
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.03 OrthoFinder output from all 47 species
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.02 OrthoFinder output from all 47 species
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.03 OrthoFinder output from all 47 species
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 OrthoFinder output from all 47 species
Adi_g011550 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014210 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22535 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52910 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14195 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23326 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68961 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70240 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02131.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20025.t1 PDR1, ATPDR1,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53447.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64035.t1 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64035.t2 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72848.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011362 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=327-4706 0.04 OrthoFinder output from all 47 species
Azfi_s0232.g059286 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=735-5249 0.03 OrthoFinder output from all 47 species
Cba_g10025 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G065600.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09408 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07439 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26471 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017185001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01017200001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
GSVIVT01017201001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01017204001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01031314001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01033804001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034746001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034748001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01036184001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_15493 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_38109 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g42370.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g42380.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g42410.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g11760.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g21340.1 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os07g33780.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os08g29570.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os09g16449.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g24204 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426781g0010 PDR4, ATPDR4 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10429200g0010 PDR6, ATPDR6 ABC transporter G family member 34 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10437002g0020 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10437197g0020 PDR6, ATPDR6 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_178007g0010 PEN3, ABCG36,... RAB-GTPase-activating protein (RAB-GAP). subfamily ABCG... 0.02 OrthoFinder output from all 47 species
MA_184352g0010 ABCG40, PDR12,... ABC transporter G family member 36 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_249533g0010 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3894g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp4g05490.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp4g06670.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g14205 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04816 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64480 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01898 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20429 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09231 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57627 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000037 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=400-4878 0.02 OrthoFinder output from all 47 species
Sam_g29979 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37860 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo267739 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc05g055330.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc06g076930.2.1 ATPDR3, PDR3,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc08g067610.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc09g091660.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g21976 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09989 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27149 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006460_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e020667_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e024257_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e027850_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e037233_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009039 urease activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019627 urea metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043419 urea catabolic process IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 877 1005
IPR003439 ABC_transporter-like_ATP-bd 199 356
IPR013525 ABC_2_trans 511 722
IPR013525 ABC_2_trans 1151 1364
IPR013581 PDR_assoc 727 790
No external refs found!