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Aliases : PSRP5, evm_27.TU.AmTr_v1.0_scaffold00039.184
Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psPSRP5 component
Gene families : OG0007652 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007652_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00039p00213540 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G56910 | PSRP5 | plastid-specific 50S ribosomal protein 5 | 0.09 | OrthoFinder output from all 47 species | |
| Aev_g17766 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g35452 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20889 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g21728 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g03750 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008656 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G029200.1 | Ceric.06G029200 | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g12621 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23334 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01939 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31082 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025849001 | PSRP5 | Protein biosynthesis.organelle translation... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_24749 | No alias | component psPSRP5 of large ribosomal subunit proteome | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g17150.1 | PSRP5, LOC_Os01g17150 | component psPSRP5 of large ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
| Len_g02486 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| MA_317435g0010 | PSRP5 | component psPSRP5 of large ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Mp6g16600.1 | PSRP5 | component psPSRP5 of large ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g17871 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28770 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g08742 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c5_5090V3.1 | Pp3c5_5090 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007874 | No alias | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g081100.3.1 | PSRP5, Solyc10g081100 | component psPSRP5 of large ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g46739 | PSRP5 | component *(cL37) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017391_P001 | PSRP5, Zm00001e017391 | component psPSRP5 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e025476_P001 | PSRP5, Zm00001e025476 | component psPSRP5 of large ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0051920 | peroxiredoxin activity | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |