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Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.150
Description : Cell wall.pectin.modification and degradation.pectate lyase
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00171p00044290 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| AT1G04680 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G14420 | AT59 | Pectate lyase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G30350 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G67750 | No alias | Pectate lyase family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G02720 | No alias | Pectate lyase family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| AT4G13210 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G24780 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g19777 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16408 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g10720 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g03233 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g23901 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20815 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21580 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g63228 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g65574 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene12080.t1 | Aspi01Gene12080 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011291 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=272-1573 | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024858 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1242 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G036500.1 | Ceric.05G036500 | EC_4.2 carbon-oxygen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G043200.1 | Ceric.14G043200 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G053300.1 | Ceric.14G053300 | EC_4.2 carbon-oxygen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G068000.1 | Ceric.22G068000 | EC_4.2 carbon-oxygen lyase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.26G007400.1 | Ceric.26G007400 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G051100.1 | RHS14, Ceric.30G051100 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G051200.1 | RHS14, Ceric.30G051200 | EC_4.2 carbon-oxygen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G020500.1 | Ceric.34G020500 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11741 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12057 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43009 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g40377 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46389 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g03656 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g05863 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13542 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13672 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15970 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000592001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014682001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016209001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028548001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029048001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g05050.1 | LOC_Os04g05050 | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Len_g10584 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13639 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g50589 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_101171g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10353668g0010 | No alias | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| MA_103716g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426822g0020 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430145g0030 | No alias | pectate lyase | 0.08 | OrthoFinder output from all 47 species | |
| MA_10437227g0020 | No alias | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| MA_10437227g0030 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| MA_1164682g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| MA_203992g0010 | No alias | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| MA_474372g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_6474333g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.03 | OrthoFinder output from all 47 species | |
| MA_66914g0010 | No alias | pectate lyase | 0.07 | OrthoFinder output from all 47 species | |
| MA_91467g0020 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_956526g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_97947g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g00770.1 | No alias | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Mp8g10190.1 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26214 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g26215 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28391 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41164 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41165 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41450 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g24097 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g27506 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g27978 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003136 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1299 | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0093.g019058 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1206 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16922 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g39754 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g093580.4.1 | Solyc02g093580 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g071840.3.1 | Solyc06g071840 | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07683 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g09317 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004654_P002 | Zm00001e004654 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008755_P002 | Zm00001e008755 | pectate lyase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 164 | 352 |
| No external refs found! |