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  5. AMTR_s00039p00166770

AMTR_s00039p00166770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.123

Description : Membrane protein PM19L OS=Oryza sativa subsp. japonica


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00166770
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G29520 No alias AWPM-19-like family protein 0.05 OrthoFinder output from all 47 species
AT5G18970 No alias AWPM-19-like family protein 0.04 OrthoFinder output from all 47 species
AT5G46530 No alias AWPM-19-like family protein 0.04 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00976.t1 Aspi01Gene00976 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34671.t1 Aspi01Gene34671 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34673.t1 Aspi01Gene34673 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44336.t1 Aspi01Gene44336 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007412 No alias not classified & original description: CDS=218-754 0.03 OrthoFinder output from all 47 species
Ceric.22G070800.1 Ceric.22G070800 not classified & original description: pacid=50615256... 0.03 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.02 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.03 OrthoFinder output from all 47 species
Dcu_g40048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017867001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os01g14530.1 LOC_Os01g14530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g12430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10157399g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10428014g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10428394g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_199g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.03 OrthoFinder output from all 47 species
Sam_g06806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Smo437726 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016338_P001 Zm00001e016338 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020052_P001 Zm00001e020052 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026824_P001 Zm00001e026824 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e028127_P001 Zm00001e028127 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 143
No external refs found!